Gene
rps27a
- ID
- ZDB-GENE-030131-10018
- Name
- ribosomal protein S27a
- Symbol
- rps27a Nomenclature History
- Previous Names
-
- hm:zeh0386
- ik:tdsubc_1f2
- tdsubc_1f2
- xx:tdsubc_1f2
- zgc:66168
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Predicted to have protein tag and ubiquitin protein ligase binding activity. Predicted to be involved in modification-dependent protein catabolic process and protein ubiquitination. Predicted to localize to cytosolic small ribosomal subunit and nucleus. Orthologous to human RPS27A (ribosomal protein S27a).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:66168 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019954 | Ubiquitin conserved site |
| Domain | IPR000626 | Ubiquitin-like domain |
| Domain | IPR002906 | Small ribosomal subunit protein eS31 |
| Domain | IPR019956 | Ubiquitin domain |
| Family | IPR050158 | Ubiquitin and ubiquitin-like |
| Homologous_superfamily | IPR011332 | Zinc-binding ribosomal protein |
| Homologous_superfamily | IPR029071 | Ubiquitin-like domain superfamily |
| Homologous_superfamily | IPR038582 | Small ribosomal subunit protein eS31 eukaryotic-type superfamily |
Domain Details Per Protein
| Protein | Length | Small ribosomal subunit protein eS31 | Small ribosomal subunit protein eS31 eukaryotic-type superfamily | Ubiquitin and ubiquitin-like | Ubiquitin conserved site | Ubiquitin domain | Ubiquitin-like domain | Ubiquitin-like domain superfamily | Zinc-binding ribosomal protein |
|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q7SXA3
|
156 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rps27a-201
(1)
|
Ensembl | 668 nt | ||
| mRNA |
rps27a-204
(1)
|
Ensembl | 721 nt | ||
| ncRNA |
rps27a-003
(1)
|
Ensembl | 684 nt | ||
| ncRNA |
rps27a-004
(1)
|
Ensembl | 820 nt | ||
| ncRNA |
rps27a-005
(1)
|
Ensembl | 601 nt |
Interactions and Pathways
No data available
Plasmids
No data available